Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SME97159.1 | SME97179.1 | SAMN02982989_0358 | SAMN02982989_0360 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | HemY protein. | 0.818 |
| SME97159.1 | SME97503.1 | SAMN02982989_0358 | SAMN02982989_0385 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Invasion associated locus B (IalB) protein. | 0.604 |
| SME97159.1 | SME98014.1 | SAMN02982989_0358 | SAMN02982989_0429 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.547 |
| SME97159.1 | SMF33362.1 | SAMN02982989_0358 | SAMN02982989_1226 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.427 |
| SME97159.1 | SMF34310.1 | SAMN02982989_0358 | SAMN02982989_1278 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Predicted lipid-binding transport protein, Tim44 family. | 0.527 |
| SME97159.1 | SMF34408.1 | SAMN02982989_0358 | SAMN02982989_1295 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | ATP-dependent helicase/nuclease subunit B. | 0.701 |
| SME97159.1 | SMF34430.1 | SAMN02982989_0358 | SAMN02982989_1298 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | PAS fold. | 0.583 |
| SME97179.1 | SME97159.1 | SAMN02982989_0360 | SAMN02982989_0358 | HemY protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.818 |
| SME97179.1 | SME97503.1 | SAMN02982989_0360 | SAMN02982989_0385 | HemY protein. | Invasion associated locus B (IalB) protein. | 0.761 |
| SME97179.1 | SME98014.1 | SAMN02982989_0360 | SAMN02982989_0429 | HemY protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.643 |
| SME97179.1 | SMF33362.1 | SAMN02982989_0360 | SAMN02982989_1226 | HemY protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.723 |
| SME97179.1 | SMF34310.1 | SAMN02982989_0360 | SAMN02982989_1278 | HemY protein. | Predicted lipid-binding transport protein, Tim44 family. | 0.722 |
| SME97179.1 | SMF34408.1 | SAMN02982989_0360 | SAMN02982989_1295 | HemY protein. | ATP-dependent helicase/nuclease subunit B. | 0.686 |
| SME97179.1 | SMF34430.1 | SAMN02982989_0360 | SAMN02982989_1298 | HemY protein. | PAS fold. | 0.675 |
| SME97179.1 | SMF34462.1 | SAMN02982989_0360 | SAMN02982989_1303 | HemY protein. | Two-component system, OmpR family, sensor histidine kinase ChvG. | 0.678 |
| SME97179.1 | SMF50816.1 | SAMN02982989_0360 | SAMN02982989_2846 | HemY protein. | DNA-binding transcriptional regulator, MarR family. | 0.635 |
| SME97179.1 | SMF51263.1 | SAMN02982989_0360 | SAMN02982989_3000 | HemY protein. | Hypothetical protein. | 0.602 |
| SME97503.1 | SME97159.1 | SAMN02982989_0385 | SAMN02982989_0358 | Invasion associated locus B (IalB) protein. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.604 |
| SME97503.1 | SME97179.1 | SAMN02982989_0385 | SAMN02982989_0360 | Invasion associated locus B (IalB) protein. | HemY protein. | 0.761 |
| SME97503.1 | SME98014.1 | SAMN02982989_0385 | SAMN02982989_0429 | Invasion associated locus B (IalB) protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.652 |
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