Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SME98593.1 | SME98600.1 | SAMN02982989_0487 | SAMN02982989_0488 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | LuxR family transcriptional regulator. | 0.520 |
SME98600.1 | SME98593.1 | SAMN02982989_0488 | SAMN02982989_0487 | LuxR family transcriptional regulator. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.520 |
SME98600.1 | SMF05749.1 | SAMN02982989_0488 | SAMN02982989_4784 | LuxR family transcriptional regulator. | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | 0.542 |
SME98600.1 | SMF24826.1 | SAMN02982989_0488 | SAMN02982989_3246 | LuxR family transcriptional regulator. | Acyl homoserine lactone synthase. | 0.832 |
SME98600.1 | SMF25536.1 | SAMN02982989_0488 | SAMN02982989_3302 | LuxR family transcriptional regulator. | Regulatory protein, luxR family. | 0.715 |
SME98600.1 | SMF26028.1 | SAMN02982989_0488 | SAMN02982989_3325 | LuxR family transcriptional regulator. | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | 0.542 |
SME98600.1 | SMF40941.1 | SAMN02982989_0488 | SAMN02982989_1879 | LuxR family transcriptional regulator. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.454 |
SME98600.1 | SMF56412.1 | SAMN02982989_0488 | SAMN02982989_0163 | LuxR family transcriptional regulator. | DNA-binding transcriptional regulator, CsgD family. | 0.739 |
SME98600.1 | SMF59351.1 | SAMN02982989_0488 | SAMN02982989_0928 | LuxR family transcriptional regulator. | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | 0.542 |
SME98600.1 | SMF59356.1 | SAMN02982989_0488 | SAMN02982989_0929 | LuxR family transcriptional regulator. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.454 |
SME98600.1 | SMF60342.1 | SAMN02982989_0488 | SAMN02982989_1052 | LuxR family transcriptional regulator. | Hypothetical protein. | 0.454 |
SMF05749.1 | SME98600.1 | SAMN02982989_4784 | SAMN02982989_0488 | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | LuxR family transcriptional regulator. | 0.542 |
SMF05749.1 | SMF59356.1 | SAMN02982989_4784 | SAMN02982989_0929 | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.517 |
SMF24826.1 | SME98600.1 | SAMN02982989_3246 | SAMN02982989_0488 | Acyl homoserine lactone synthase. | LuxR family transcriptional regulator. | 0.832 |
SMF24826.1 | SMF25536.1 | SAMN02982989_3246 | SAMN02982989_3302 | Acyl homoserine lactone synthase. | Regulatory protein, luxR family. | 0.904 |
SMF24826.1 | SMF56412.1 | SAMN02982989_3246 | SAMN02982989_0163 | Acyl homoserine lactone synthase. | DNA-binding transcriptional regulator, CsgD family. | 0.992 |
SMF25536.1 | SME98600.1 | SAMN02982989_3302 | SAMN02982989_0488 | Regulatory protein, luxR family. | LuxR family transcriptional regulator. | 0.715 |
SMF25536.1 | SMF24826.1 | SAMN02982989_3302 | SAMN02982989_3246 | Regulatory protein, luxR family. | Acyl homoserine lactone synthase. | 0.904 |
SMF25536.1 | SMF56412.1 | SAMN02982989_3302 | SAMN02982989_0163 | Regulatory protein, luxR family. | DNA-binding transcriptional regulator, CsgD family. | 0.478 |
SMF26028.1 | SME98600.1 | SAMN02982989_3325 | SAMN02982989_0488 | Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family. | LuxR family transcriptional regulator. | 0.542 |
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