STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF60423.1Replication initiation protein RepC; Manually curated. (403 aa)    
Predicted Functional Partners:
SMF60504.1
Chromosome partitioning protein.
 
   
 0.890
SMF60496.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
   
 0.885
SMF24816.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
   
 0.805
SMF60386.1
Chromosome partitioning protein.
 
   
 0.788
SMF60378.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
   
 0.787
SMF24822.1
Chromosome partitioning protein; Manually curated.
 
   
 0.784
SMF25750.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
  
     0.724
SMF56510.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
  
     0.719
SMF20561.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
  
     0.692
SMF48772.1
Copper chaperone.
 
   
 0.688
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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