STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF41661.1Glycine/D-amino acid oxidase. (438 aa)    
Predicted Functional Partners:
SMF58354.1
Sarcosine oxidase subunit alpha.
 
 0.983
SMF06182.1
Sarcosine oxidase subunit alpha.
 
 0.983
SMF05654.1
Glutamate synthase (NADH) large subunit.
    
 0.795
SMF41667.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.773
SMF41672.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.773
SMF41678.1
Branched-chain amino acid transport system ATP-binding protein.
       0.773
SMF41685.1
Branched-chain amino acid transport system ATP-binding protein.
       0.773
SMF58355.1
Sarcosine oxidase subunit delta.
 
  0.747
SMF41656.1
Branched-chain amino acid transport system substrate-binding protein.
       0.737
SMF44998.1
2,4-dienoyl-CoA reductase.
   
 0.734
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.