STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF52659.1Methyltransferase domain-containing protein. (430 aa)    
Predicted Functional Partners:
SMF52648.1
Glucose-1-phosphate cytidylyltransferase.
 
     0.947
SMF52637.1
N-acetylglucosaminyl deacetylase, LmbE family.
 
     0.939
SMF52700.1
Nucleoside-diphosphate-sugar epimerase.
  
  0.890
SMF43458.1
Glucose-1-phosphate cytidylyltransferase.
 
     0.750
SMF52680.1
Aminopeptidase-like domain-containing protein.
 
 
   0.736
SMF58354.1
Sarcosine oxidase subunit alpha.
  
 
  0.707
SMF06182.1
Sarcosine oxidase subunit alpha.
  
 
  0.707
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.694
SMF70313.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
   
  0.686
SMF19487.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
   
  0.686
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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