STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF65497.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
SMF65537.1
Hypothetical protein.
       0.787
SMF65553.1
Hypothetical protein.
       0.777
SMF65435.1
Hypothetical protein.
       0.775
SMF65405.1
Hypothetical protein.
       0.773
SMF65416.1
Hypothetical protein.
       0.773
SMF65422.1
Hypothetical protein.
       0.773
SMF65453.1
Hypothetical protein.
       0.773
SMF65458.1
Hypothetical protein.
       0.773
SMF65460.1
Hypothetical protein.
       0.773
SMF65462.1
Hypothetical protein.
       0.773
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.