Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMF08610.1 | SMF18642.1 | SAMN02982989_5010 | SAMN02982989_5629 | Cytochrome c oxidase subunit 2. | Cytochrome o ubiquinol oxidase operon protein cyoD. | 0.998 |
SMF08610.1 | SMF18699.1 | SAMN02982989_5010 | SAMN02982989_5632 | Cytochrome c oxidase subunit 2. | Cytochrome o ubiquinol oxidase subunit 2. | 0.979 |
SMF08610.1 | SMF46420.1 | SAMN02982989_5010 | SAMN02982989_2367 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.980 |
SMF08610.1 | SMF46480.1 | SAMN02982989_5010 | SAMN02982989_2372 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 3. | 0.999 |
SMF08610.1 | SMF58811.1 | SAMN02982989_5010 | SAMN02982989_0839 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 2. | 0.974 |
SMF08610.1 | SMF58824.1 | SAMN02982989_5010 | SAMN02982989_0842 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 3. | 0.999 |
SMF08610.1 | SMF72771.1 | SAMN02982989_5010 | SAMN02982989_4213 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 3. | 0.999 |
SMF08610.1 | SMF72779.1 | SAMN02982989_5010 | SAMN02982989_4214 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
SMF08610.1 | SMF72786.1 | SAMN02982989_5010 | SAMN02982989_4215 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 2. | 0.999 |
SMF08610.1 | SMF74195.1 | SAMN02982989_5010 | SAMN02982989_4351 | Cytochrome c oxidase subunit 2. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
SMF18642.1 | SMF08610.1 | SAMN02982989_5629 | SAMN02982989_5010 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 2. | 0.998 |
SMF18642.1 | SMF18699.1 | SAMN02982989_5629 | SAMN02982989_5632 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome o ubiquinol oxidase subunit 2. | 0.999 |
SMF18642.1 | SMF46420.1 | SAMN02982989_5629 | SAMN02982989_2367 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.995 |
SMF18642.1 | SMF46480.1 | SAMN02982989_5629 | SAMN02982989_2372 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 3. | 0.995 |
SMF18642.1 | SMF58811.1 | SAMN02982989_5629 | SAMN02982989_0839 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 2. | 0.994 |
SMF18642.1 | SMF58824.1 | SAMN02982989_5629 | SAMN02982989_0842 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 3. | 0.994 |
SMF18642.1 | SMF72771.1 | SAMN02982989_5629 | SAMN02982989_4213 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 3. | 0.994 |
SMF18642.1 | SMF72779.1 | SAMN02982989_5629 | SAMN02982989_4214 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.994 |
SMF18642.1 | SMF72786.1 | SAMN02982989_5629 | SAMN02982989_4215 | Cytochrome o ubiquinol oxidase operon protein cyoD. | Cytochrome c oxidase subunit 2. | 0.997 |
SMF18699.1 | SMF08610.1 | SAMN02982989_5632 | SAMN02982989_5010 | Cytochrome o ubiquinol oxidase subunit 2. | Cytochrome c oxidase subunit 2. | 0.979 |
page 1 of 6