STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF03636.1FAD/FMN-containing dehydrogenase. (468 aa)    
Predicted Functional Partners:
SMF03646.1
Putative NADPH-quinone reductase (modulator of drug activity B).
 
     0.944
SMF03627.1
Cytosine deaminase.
 
     0.915
SMF03605.1
NitT/TauT family transport system ATP-binding protein.
 
     0.857
SMF03617.1
NitT/TauT family transport system permease protein.
 
     0.850
SMF05654.1
Glutamate synthase (NADH) large subunit.
    
 0.837
SMF03595.1
NitT/TauT family transport system substrate-binding protein.
 
     0.835
SMF62268.1
Hypothetical protein.
   
   0.833
SMF21558.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.768
SMF40750.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.765
SMF68323.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.765
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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