STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF09517.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
SMF09524.1
Peptide/nickel transport system permease protein.
 
  0.933
SMF09531.1
Peptide/nickel transport system permease protein.
 
 
  0.877
SMF09510.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.803
SMF09502.1
NADPH:quinone reductase.
       0.757
SMF09482.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
 
     0.664
SMF09490.1
N-methylhydantoinase A.
       0.621
SMF09496.1
N-methylhydantoinase B.
       0.621
SMF09537.1
Peptide/nickel transport system substrate-binding protein.
 
 
  0.616
SMF22056.1
Peptide/nickel transport system permease protein.
 
 
  0.612
SMF18141.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.603
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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