STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF10020.1Succinoglycan biosynthesis protein ExoH; Manually curated. (382 aa)    
Predicted Functional Partners:
SMF09998.1
Endo-1,3-1,4-beta-glycanase ExoK.
 
   
 0.898
SMF09985.1
Succinoglycan biosynthesis protein ExoL.
 
   
 0.834
SMF10030.1
Succinoglycan exporter.
 
  
 0.813
SMF10081.1
Succinoglycan biosynthesis protein ExoV.
 
   
 0.790
SMF58794.1
Uncharacterized membrane protein YesL.
  
     0.771
SMF03431.1
Methyltransferase domain-containing protein.
 
     0.768
SMF09958.1
Succinoglycan biosynthesis protein ExoM.
 
   
 0.767
SMF09962.1
Succinoglycan biosynthesis protein ExoA.
 
   
 0.756
SMF47822.1
Alpha/beta hydrolase family protein.
  
     0.746
SMF06890.1
Protein of unknown function.
  
     0.738
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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