STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF11132.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (308 aa)    
Predicted Functional Partners:
SMF11122.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
SMF11147.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.983
SMF11075.1
Simple sugar transport system substrate-binding protein.
 
 
 0.972
SMF38973.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.967
SMF69031.1
Simple sugar transport system ATP-binding protein.
 
 0.964
SMF38969.1
Simple sugar transport system ATP-binding protein.
 
 0.947
SMF38963.1
Basic membrane protein A.
 
 
 0.911
SMF69043.1
Simple sugar transport system substrate-binding protein.
 
 
 0.903
SMF69036.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.877
amiF
Formamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
 
     0.874
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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