STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF19265.1Polar amino acid transport system permease protein. (220 aa)    
Predicted Functional Partners:
SMF19277.1
Polar amino acid transport system ATP-binding protein.
  0.996
SMF19260.1
Polar amino acid transport system permease protein.
 
  
 
0.983
SME99414.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.970
SMF19267.1
Polar amino acid transport system substrate-binding protein.
  0.960
SMF67941.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  0.932
SMF58362.1
Polar amino acid transport system ATP-binding protein.
 
  0.918
SMF34635.1
Glutamate/aspartate transport system ATP-binding protein.
 
  0.918
SMF34666.1
Polar amino acid transport system ATP-binding protein.
 
  0.918
SMF13107.1
Polar amino acid transport system ATP-binding protein.
 
  0.916
SMF66879.1
General L-amino acid ABC transporter ATP-binding protein.
 
  0.914
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.