STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO45800.1Uncharacterised protein. (492 aa)    
Predicted Functional Partners:
gldL
Gliding motility-associated protein GldL.
  
     0.748
CUP38536.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
  
     0.737
ompA
Outer membrane protein II*.
 
 
 0.731
CUO47981.1
Predicted ATPase.
  
    0.730
CUP19227.1
Domain of uncharacterised function (DUF3332).
  
     0.718
gldN
Gliding motility associated protein GldN.
  
     0.715
CUP68794.1
Gliding motility-associated C-terminal domain.
  
    0.711
CUP81999.1
PG33.
  
   0.706
pkn1_2
Serine/threonine-protein kinase pkn1.
  
 
 0.697
CUO41290.1
Uncharacterized protein involved in outer membrane biogenesis.
  
     0.668
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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