STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO49579.1Trehalose utilisation. (304 aa)    
Predicted Functional Partners:
CUO47875.1
Domain of Uncharacterised Function (DUF1080).
     0.816
CUP75945.1
Translocation protein TolB.
  
  0.792
CUP60145.1
NIPSNAP.
  
     0.743
CUP60187.1
Uncharacterised protein.
  
    0.715
CUO82613.1
Predicted dienelactone hydrolase.
  
    0.709
CUP79579.1
Domain of Uncharacterised Function (DUF1080).
 
     0.678
CUP45150.1
Uncharacterised protein.
  
     0.668
CUP52727.1
Alpha/beta hydrolase family.
  
     0.645
iolG_5
Inositol 2-dehydrogenase.
 
  
  0.617
CUP34112.1
Domain of Uncharacterised Function (DUF1080).
 
     0.608
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.