STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepA_1Staphylococcal virulence regulator protein A. (447 aa)    
Predicted Functional Partners:
norM_1
Na(+)/drug antiporter.
  
     0.668
mdtK_1
Multidrug-efflux transporter.
  
     0.665
CUO50056.1
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases.
 
     0.582
CUO50092.1
Uncharacterized conserved protein.
       0.501
corA_1
Magnesium transport protein CorA.
       0.456
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.