STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO52212.1Outer membrane receptor for ferrienterochelin and colicins. (1057 aa)    
Predicted Functional Partners:
CUO52244.1
Susd and RagB outer membrane lipoprotein.
 
     0.913
CUP55768.1
Starch-binding associating with outer membrane.
     0.792
CUP43347.1
SusD family.
  
     0.738
CUO85522.1
SusD family.
  
     0.734
CUP19185.1
SusD family.
  
     0.729
CUO88282.1
SusD family.
  
     0.700
CUO99245.1
SusD family.
  
     0.673
CUO81938.1
SusD family.
  
     0.664
CUP36311.1
SusD family.
  
     0.643
CUP28571.1
Starch-binding associating with outer membrane.
     0.634
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.