Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUO53662.1 | CUO53742.1 | ERS852463_00464 | ERS852463_00466 | N-carbamoyl-D-amino acid hydrolase. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.800 |
| CUO53662.1 | pabB | ERS852463_00464 | ERS852463_00465 | N-carbamoyl-D-amino acid hydrolase. | Para-aminobenzoate synthase component 1. | 0.775 |
| CUO53742.1 | CUO53662.1 | ERS852463_00466 | ERS852463_00464 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | N-carbamoyl-D-amino acid hydrolase. | 0.800 |
| CUO53742.1 | aroC | ERS852463_00466 | ERS852463_02976 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.474 |
| CUO53742.1 | aroF | ERS852463_00466 | ERS852463_03074 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.873 |
| CUO53742.1 | pabB | ERS852463_00466 | ERS852463_00465 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Para-aminobenzoate synthase component 1. | 0.997 |
| CUO53742.1 | trpD2 | ERS852463_00466 | ERS852463_03481 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Anthranilate phosphoribosyltransferase 2; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.477 |
| CUO53742.1 | trpG | ERS852463_00466 | ERS852463_03480 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Anthranilate synthase component II. | 0.790 |
| aroC | CUO53742.1 | ERS852463_02976 | ERS852463_00466 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.474 |
| aroC | aroF | ERS852463_02976 | ERS852463_03074 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.995 |
| aroC | pabB | ERS852463_02976 | ERS852463_00465 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase component 1. | 0.847 |
| aroC | trpA | ERS852463_02976 | ERS852463_03484 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.722 |
| aroC | trpB_2 | ERS852463_02976 | ERS852463_03478 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.550 |
| aroC | trpC | ERS852463_02976 | ERS852463_03482 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.648 |
| aroC | trpD2 | ERS852463_02976 | ERS852463_03481 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase 2; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.735 |
| aroC | trpF | ERS852463_02976 | ERS852463_03483 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.590 |
| aroC | trpG | ERS852463_02976 | ERS852463_03480 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component II. | 0.890 |
| aroF | CUO53742.1 | ERS852463_03074 | ERS852463_00466 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.873 |
| aroF | aroC | ERS852463_03074 | ERS852463_02976 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.995 |
| aroF | pabB | ERS852463_03074 | ERS852463_00465 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Para-aminobenzoate synthase component 1. | 0.892 |
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