STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO55942.1Uncharacterised protein. (104 aa)    
Predicted Functional Partners:
dhaK
PTS-dependent dihydroxyacetone kinase%2C dihydroxyacetone-binding subunit dhaK.
 
     0.819
dhaL
PTS-dependent dihydroxyacetone kinase%2C ADP-binding subunit dhaL.
 
     0.810
lsrF
Uncharacterized aldolase lsrF.
 
     0.801
CUO55722.1
D-lyxose ketol-isomerase.
 
     0.788
CUO55636.1
Predicted thiol oxidoreductase.
 
     0.761
CUO40159.1
Gliding motility-associated lipoprotein GldK.
 
     0.735
CUO55683.1
Uncharacterised protein.
 
     0.720
CUO55884.1
Cytochrome c-type biogenesis protein CcsB.
 
     0.649
CUO75634.1
Phosphate-selective porin.
  
     0.649
ptp
Prolyl tri/tetrapeptidyl aminopeptidase precursor.
  
     0.591
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.