STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO77812.1Domain of Uncharacterised Function (DUF1080). (429 aa)    
Predicted Functional Partners:
iolG_5
Inositol 2-dehydrogenase.
  
     0.760
iolG_2
Inositol 2-dehydrogenase.
  
     0.748
iolG_4
Inositol 2-dehydrogenase.
  
     0.745
iolG_7
Inositol 2-dehydrogenase.
  
     0.731
CUP29264.1
Glycosyl hydrolase family 109 protein 1 precursor.
 
     0.730
CUP43669.1
Glycosyl hydrolase family 109 protein 1 precursor.
  
     0.684
CUP29227.1
Fructoselysine 3-epimerase.
  
     0.661
CUP71757.1
Hydroxypyruvate isomerase.
  
     0.655
CUO38607.1
Xylose isomerase-like TIM barrel.
 
     0.632
CUO77850.1
Uncharacterised protein.
       0.565
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.