STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO94575.1Uncharacterised protein. (352 aa)    
Predicted Functional Partners:
gltB
Ferredoxin-dependent glutamate synthase 1.
    
  0.825
CUO94511.1
Uncharacterised protein.
       0.757
CUO94547.1
Uncharacterised protein.
       0.757
CUO94610.1
Uncharacterised protein.
       0.757
CUO75985.1
Uncharacterised protein.
  
  0.729
CUP57893.1
Uncharacterised protein.
  
  0.729
CUO94467.1
Uncharacterised protein.
       0.690
porA_1
Pyruvate synthase subunit porA.
   
  0.688
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.674
guaB
Inosine-5'-monophosphate dehydrogenase.
    
  0.633
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.