STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO95064.1Outer membrane receptor for ferrienterochelin and colicins. (919 aa)    
Predicted Functional Partners:
CUO95088.1
Uncharacterised protein.
       0.756
CUP03340.1
TonB family C-terminal domain; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.692
CUO94969.1
Fec operon regulator FecR.
 
    0.595
CUP77088.1
Outer membrane protein (porin).
  
     0.594
CUO95000.1
Outer membrane cobalamin receptor protein.
 
    
0.583
CUP49365.1
Outer membrane cobalamin receptor protein.
  
     0.578
fecI_3
Probable RNA polymerase sigma factor fecI; Belongs to the sigma-70 factor family. ECF subfamily.
    0.573
CUO95032.1
Uncharacterised protein.
       0.569
CUO95880.1
Outer membrane cobalamin receptor protein.
  
     0.545
CUO94938.1
Uncharacterised protein.
       0.538
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.