STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_6Macrolide export ATP-binding/permease protein MacB. (421 aa)    
Predicted Functional Partners:
macB_5
Macrolide export ATP-binding/permease protein MacB.
  0.993
macB_11
Macrolide export ATP-binding/permease protein MacB.
  0.985
lolD_3
Lipoprotein-releasing system ATP-binding protein LolD.
  0.974
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
  0.969
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
 
  0.965
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 
  0.965
lolD_5
Lipoprotein-releasing system ATP-binding protein LolD.
 
  0.965
lolD_4
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.954
macA_2
Macrolide-specific efflux protein macA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.926
ftsE
Cell division ATP-binding protein FtsE.
 
      0.874
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.