Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO39675.1 | CUP32906.1 | ERS852463_00108 | ERS852463_02326 | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | Predicted methyltransferase (contains TPR repeat). | 0.799 |
CUO39675.1 | CUP39445.1 | ERS852463_00108 | ERS852463_02481 | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | Uncharacterised protein. | 0.723 |
CUO39675.1 | bamD | ERS852463_00108 | ERS852463_00433 | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | DNA uptake lipoprotein. | 0.515 |
CUO39675.1 | kstR2 | ERS852463_00108 | ERS852463_01965 | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | HTH-type transcriptional repressor KstR2. | 0.484 |
CUP32906.1 | CUO39675.1 | ERS852463_02326 | ERS852463_00108 | Predicted methyltransferase (contains TPR repeat). | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | 0.799 |
CUP32906.1 | CUP39445.1 | ERS852463_02326 | ERS852463_02481 | Predicted methyltransferase (contains TPR repeat). | Uncharacterised protein. | 0.772 |
CUP32906.1 | bamD | ERS852463_02326 | ERS852463_00433 | Predicted methyltransferase (contains TPR repeat). | DNA uptake lipoprotein. | 0.604 |
CUP32906.1 | kstR2 | ERS852463_02326 | ERS852463_01965 | Predicted methyltransferase (contains TPR repeat). | HTH-type transcriptional repressor KstR2. | 0.462 |
CUP39445.1 | CUO39675.1 | ERS852463_02481 | ERS852463_00108 | Uncharacterised protein. | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | 0.723 |
CUP39445.1 | CUP32906.1 | ERS852463_02481 | ERS852463_02326 | Uncharacterised protein. | Predicted methyltransferase (contains TPR repeat). | 0.772 |
CUP39445.1 | bamD | ERS852463_02481 | ERS852463_00433 | Uncharacterised protein. | DNA uptake lipoprotein. | 0.574 |
CUP39445.1 | kstR2 | ERS852463_02481 | ERS852463_01965 | Uncharacterised protein. | HTH-type transcriptional repressor KstR2. | 0.668 |
CUP39445.1 | rffG_1 | ERS852463_02481 | ERS852463_02584 | Uncharacterised protein. | dTDP-glucose 4%2C6-dehydratase 2. | 0.435 |
bamD | CUO39675.1 | ERS852463_00433 | ERS852463_00108 | DNA uptake lipoprotein. | Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. | 0.515 |
bamD | CUP32906.1 | ERS852463_00433 | ERS852463_02326 | DNA uptake lipoprotein. | Predicted methyltransferase (contains TPR repeat). | 0.604 |
bamD | CUP39445.1 | ERS852463_00433 | ERS852463_02481 | DNA uptake lipoprotein. | Uncharacterised protein. | 0.574 |
bamD | kstR2 | ERS852463_00433 | ERS852463_01965 | DNA uptake lipoprotein. | HTH-type transcriptional repressor KstR2. | 0.477 |
fabG_1 | fabH_1 | ERS852463_01963 | ERS852463_01964 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier-protein] synthase 3. | 0.963 |
fabG_1 | kstR2 | ERS852463_01963 | ERS852463_01965 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | HTH-type transcriptional repressor KstR2. | 0.718 |
fabG_1 | truC | ERS852463_01963 | ERS852463_01962 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | tRNA pseudouridine synthase C. | 0.557 |
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