sigY protein (Parabacteroides merdae) - STRING interaction network

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Score

sigY

RNA polymerase sigma factor sigY; Belongs to the sigma-70 factor family. ECF subfamily. (169 aa)

Predicted Functional Partners:

sigV_2

0.656

rpoE_3

0.639

rpoE_2

0.637

sigM_4

0.637

sigV_5

0.627

rpoC

0.567

sigX_1

0.557

rpoB

0.535

ltaE

0.529

rpoE_1

0.523

Your Current Organism:

Parabacteroides merdae

NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ltaE	sigY	ERS852463_01976	ERS852463_01977	Low specificity L-threonine aldolase.	RNA polymerase sigma factor sigY; Belongs to the sigma-70 factor family. ECF subfamily.	0.529
rpoB	rpoC	ERS852463_01734	ERS852463_01735	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoE_1	ERS852463_01734	ERS852463_00177	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-24; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoB	rpoE_2	ERS852463_01734	ERS852463_01025	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-24; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoB	rpoE_3	ERS852463_01734	ERS852463_01282	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-24.	0.535
rpoB	sigM_4	ERS852463_01734	ERS852463_03145	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigM; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoB	sigV_2	ERS852463_01734	ERS852463_01060	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoB	sigV_5	ERS852463_01734	ERS852463_03516	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoB	sigX_1	ERS852463_01734	ERS852463_01837	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigX; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoB	sigY	ERS852463_01734	ERS852463_01977	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigY; Belongs to the sigma-70 factor family. ECF subfamily.	0.535
rpoC	rpoB	ERS852463_01735	ERS852463_01734	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoE_1	ERS852463_01735	ERS852463_00177	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-24; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoC	rpoE_2	ERS852463_01735	ERS852463_01025	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-24; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoC	rpoE_3	ERS852463_01735	ERS852463_01282	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma-24.	0.567
rpoC	sigM_4	ERS852463_01735	ERS852463_03145	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigM; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoC	sigV_2	ERS852463_01735	ERS852463_01060	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoC	sigV_5	ERS852463_01735	ERS852463_03516	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoC	sigX_1	ERS852463_01735	ERS852463_01837	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigX; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoC	sigY	ERS852463_01735	ERS852463_01977	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor sigY; Belongs to the sigma-70 factor family. ECF subfamily.	0.567
rpoE_1	rpoB	ERS852463_00177	ERS852463_01734	Sigma-24; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.535