Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO50123.1 | CUP18443.1 | ERS852463_00377 | ERS852463_02010 | Transcriptional activator FtrA. | DNA-binding transcriptional regulator MelR. | 0.402 |
CUO50123.1 | adaA_1 | ERS852463_00377 | ERS852463_01737 | Transcriptional activator FtrA. | Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. | 0.493 |
CUO50123.1 | btr_1 | ERS852463_00377 | ERS852463_00205 | Transcriptional activator FtrA. | Bacillibactin transport regulator. | 0.575 |
CUO50123.1 | gltB | ERS852463_00377 | ERS852463_00484 | Transcriptional activator FtrA. | Ferredoxin-dependent glutamate synthase 1. | 0.740 |
CUO50123.1 | rpoA | ERS852463_00377 | ERS852463_03006 | Transcriptional activator FtrA. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
CUP18443.1 | CUO50123.1 | ERS852463_02010 | ERS852463_00377 | DNA-binding transcriptional regulator MelR. | Transcriptional activator FtrA. | 0.402 |
CUP18443.1 | CUP18507.1 | ERS852463_02010 | ERS852463_02011 | DNA-binding transcriptional regulator MelR. | Uncharacterised protein. | 0.449 |
CUP18443.1 | adaA_1 | ERS852463_02010 | ERS852463_01737 | DNA-binding transcriptional regulator MelR. | Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. | 0.432 |
CUP18443.1 | btr_1 | ERS852463_02010 | ERS852463_00205 | DNA-binding transcriptional regulator MelR. | Bacillibactin transport regulator. | 0.592 |
CUP18443.1 | gltB | ERS852463_02010 | ERS852463_00484 | DNA-binding transcriptional regulator MelR. | Ferredoxin-dependent glutamate synthase 1. | 0.713 |
CUP18443.1 | rpoA | ERS852463_02010 | ERS852463_03006 | DNA-binding transcriptional regulator MelR. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.555 |
CUP18507.1 | CUP18443.1 | ERS852463_02011 | ERS852463_02010 | Uncharacterised protein. | DNA-binding transcriptional regulator MelR. | 0.449 |
adaA_1 | CUO50123.1 | ERS852463_01737 | ERS852463_00377 | Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. | Transcriptional activator FtrA. | 0.493 |
adaA_1 | CUP18443.1 | ERS852463_01737 | ERS852463_02010 | Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. | DNA-binding transcriptional regulator MelR. | 0.432 |
adaA_1 | gltB | ERS852463_01737 | ERS852463_00484 | Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. | Ferredoxin-dependent glutamate synthase 1. | 0.713 |
adaA_1 | rpoA | ERS852463_01737 | ERS852463_03006 | Methylphosphotriester-DNA--protein-cysteine S-methyltransferase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
btr_1 | CUO50123.1 | ERS852463_00205 | ERS852463_00377 | Bacillibactin transport regulator. | Transcriptional activator FtrA. | 0.575 |
btr_1 | CUP18443.1 | ERS852463_00205 | ERS852463_02010 | Bacillibactin transport regulator. | DNA-binding transcriptional regulator MelR. | 0.592 |
btr_1 | gltB | ERS852463_00205 | ERS852463_00484 | Bacillibactin transport regulator. | Ferredoxin-dependent glutamate synthase 1. | 0.713 |
btr_1 | rpoA | ERS852463_00205 | ERS852463_03006 | Bacillibactin transport regulator. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
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