Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO47371.1 | ykoD | ERS852463_00306 | ERS852463_02067 | Uncharacterized conserved protein. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.404 |
CUP20760.1 | CUP20798.1 | ERS852463_02065 | ERS852463_02066 | Translocation protein TolB. | Uncharacterised protein. | 0.766 |
CUP20760.1 | argB | ERS852463_02065 | ERS852463_02068 | Translocation protein TolB. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.408 |
CUP20760.1 | ykoD | ERS852463_02065 | ERS852463_02067 | Translocation protein TolB. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.751 |
CUP20798.1 | CUP20760.1 | ERS852463_02066 | ERS852463_02065 | Uncharacterised protein. | Translocation protein TolB. | 0.766 |
CUP20798.1 | argB | ERS852463_02066 | ERS852463_02068 | Uncharacterised protein. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.413 |
CUP20798.1 | ykoD | ERS852463_02066 | ERS852463_02067 | Uncharacterised protein. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.762 |
argB | CUP20760.1 | ERS852463_02068 | ERS852463_02065 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Translocation protein TolB. | 0.408 |
argB | CUP20798.1 | ERS852463_02068 | ERS852463_02066 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Uncharacterised protein. | 0.413 |
argB | gltB | ERS852463_02068 | ERS852463_00484 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ferredoxin-dependent glutamate synthase 1. | 0.745 |
argB | ykoD | ERS852463_02068 | ERS852463_02067 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.418 |
gltB | argB | ERS852463_00484 | ERS852463_02068 | Ferredoxin-dependent glutamate synthase 1. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.745 |
gltB | ykoD | ERS852463_00484 | ERS852463_02067 | Ferredoxin-dependent glutamate synthase 1. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.424 |
panB | ykoD | ERS852463_00156 | ERS852463_02067 | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.451 |
thiQ | ykoD | ERS852463_00719 | ERS852463_02067 | Thiamine import ATP-binding protein ThiQ. | Putative HMP/thiamine import ATP-binding protein YkoD. | 0.450 |
ykoD | CUO47371.1 | ERS852463_02067 | ERS852463_00306 | Putative HMP/thiamine import ATP-binding protein YkoD. | Uncharacterized conserved protein. | 0.404 |
ykoD | CUP20760.1 | ERS852463_02067 | ERS852463_02065 | Putative HMP/thiamine import ATP-binding protein YkoD. | Translocation protein TolB. | 0.751 |
ykoD | CUP20798.1 | ERS852463_02067 | ERS852463_02066 | Putative HMP/thiamine import ATP-binding protein YkoD. | Uncharacterised protein. | 0.762 |
ykoD | argB | ERS852463_02067 | ERS852463_02068 | Putative HMP/thiamine import ATP-binding protein YkoD. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.418 |
ykoD | gltB | ERS852463_02067 | ERS852463_00484 | Putative HMP/thiamine import ATP-binding protein YkoD. | Ferredoxin-dependent glutamate synthase 1. | 0.424 |
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