Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
barA | evgS_1 | ERS852463_03178 | ERS852463_00105 | Signal transduction histidine-protein kinase BarA. | Sensor protein evgS precursor. | 0.999 |
barA | evgS_10 | ERS852463_03178 | ERS852463_03279 | Signal transduction histidine-protein kinase BarA. | Sensor protein evgS precursor. | 0.877 |
barA | evgS_11 | ERS852463_03178 | ERS852463_03437 | Signal transduction histidine-protein kinase BarA. | Sensor protein evgS precursor. | 0.999 |
barA | evgS_5 | ERS852463_03178 | ERS852463_01479 | Signal transduction histidine-protein kinase BarA. | Sensor protein evgS precursor. | 0.871 |
barA | luxQ | ERS852463_03178 | ERS852463_02872 | Signal transduction histidine-protein kinase BarA. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.973 |
barA | rcsC_1 | ERS852463_03178 | ERS852463_00047 | Signal transduction histidine-protein kinase BarA. | Sensor kinase protein RcsC. | 0.834 |
barA | rcsC_2 | ERS852463_03178 | ERS852463_01158 | Signal transduction histidine-protein kinase BarA. | Sensor kinase protein RcsC. | 0.872 |
barA | rcsC_3 | ERS852463_03178 | ERS852463_01334 | Signal transduction histidine-protein kinase BarA. | Sensor kinase protein RcsC. | 0.858 |
barA | rcsC_4 | ERS852463_03178 | ERS852463_01648 | Signal transduction histidine-protein kinase BarA. | Sensor kinase protein RcsC. | 0.871 |
barA | walR_1 | ERS852463_03178 | ERS852463_01495 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein walR. | 0.997 |
evgS_1 | barA | ERS852463_00105 | ERS852463_03178 | Sensor protein evgS precursor. | Signal transduction histidine-protein kinase BarA. | 0.999 |
evgS_1 | evgS_10 | ERS852463_00105 | ERS852463_03279 | Sensor protein evgS precursor. | Sensor protein evgS precursor. | 0.999 |
evgS_1 | evgS_11 | ERS852463_00105 | ERS852463_03437 | Sensor protein evgS precursor. | Sensor protein evgS precursor. | 0.999 |
evgS_1 | evgS_5 | ERS852463_00105 | ERS852463_01479 | Sensor protein evgS precursor. | Sensor protein evgS precursor. | 0.999 |
evgS_1 | luxQ | ERS852463_00105 | ERS852463_02872 | Sensor protein evgS precursor. | Autoinducer 2 sensor kinase/phosphatase luxQ. | 0.999 |
evgS_1 | rcsC_1 | ERS852463_00105 | ERS852463_00047 | Sensor protein evgS precursor. | Sensor kinase protein RcsC. | 0.999 |
evgS_1 | rcsC_2 | ERS852463_00105 | ERS852463_01158 | Sensor protein evgS precursor. | Sensor kinase protein RcsC. | 0.999 |
evgS_1 | rcsC_3 | ERS852463_00105 | ERS852463_01334 | Sensor protein evgS precursor. | Sensor kinase protein RcsC. | 0.999 |
evgS_1 | rcsC_4 | ERS852463_00105 | ERS852463_01648 | Sensor protein evgS precursor. | Sensor kinase protein RcsC. | 0.999 |
evgS_1 | walR_1 | ERS852463_00105 | ERS852463_01495 | Sensor protein evgS precursor. | Transcriptional regulatory protein walR. | 0.999 |
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