Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUP64353.1 | CUP64540.1 | ERS852463_03057 | ERS852463_03062 | Uncharacterised protein. | Protein of uncharacterised function (DUF3098). | 0.644 |
CUP64353.1 | ftsX | ERS852463_03057 | ERS852463_03063 | Uncharacterised protein. | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.644 |
CUP64353.1 | queA_2 | ERS852463_03057 | ERS852463_03059 | Uncharacterised protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.757 |
CUP64353.1 | sulD | ERS852463_03057 | ERS852463_03058 | Uncharacterised protein. | Bifunctional folate synthesis protein. | 0.773 |
CUP64353.1 | truB | ERS852463_03057 | ERS852463_03060 | Uncharacterised protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.644 |
CUP64353.1 | uppP | ERS852463_03057 | ERS852463_03061 | Uncharacterised protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.644 |
CUP64540.1 | CUP64353.1 | ERS852463_03062 | ERS852463_03057 | Protein of uncharacterised function (DUF3098). | Uncharacterised protein. | 0.644 |
CUP64540.1 | ftsX | ERS852463_03062 | ERS852463_03063 | Protein of uncharacterised function (DUF3098). | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.816 |
CUP64540.1 | queA_2 | ERS852463_03062 | ERS852463_03059 | Protein of uncharacterised function (DUF3098). | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.685 |
CUP64540.1 | sulD | ERS852463_03062 | ERS852463_03058 | Protein of uncharacterised function (DUF3098). | Bifunctional folate synthesis protein. | 0.673 |
CUP64540.1 | truB | ERS852463_03062 | ERS852463_03060 | Protein of uncharacterised function (DUF3098). | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.791 |
CUP64540.1 | uppP | ERS852463_03062 | ERS852463_03061 | Protein of uncharacterised function (DUF3098). | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.791 |
ftsX | CUP64353.1 | ERS852463_03063 | ERS852463_03057 | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Uncharacterised protein. | 0.644 |
ftsX | CUP64540.1 | ERS852463_03063 | ERS852463_03062 | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Protein of uncharacterised function (DUF3098). | 0.816 |
ftsX | queA_2 | ERS852463_03063 | ERS852463_03059 | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.685 |
ftsX | sulD | ERS852463_03063 | ERS852463_03058 | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Bifunctional folate synthesis protein. | 0.673 |
ftsX | truB | ERS852463_03063 | ERS852463_03060 | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.791 |
ftsX | uppP | ERS852463_03063 | ERS852463_03061 | Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.794 |
queA_2 | CUP64353.1 | ERS852463_03059 | ERS852463_03057 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Uncharacterised protein. | 0.757 |
queA_2 | CUP64540.1 | ERS852463_03059 | ERS852463_03062 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Protein of uncharacterised function (DUF3098). | 0.685 |
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