STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpCPropionyl-CoA:succinate CoA transferase. (498 aa)    
Predicted Functional Partners:
mutB
Methylmalonyl-CoA mutase large subunit.
  
 
 0.924
mutA
Methylmalonyl-CoA mutase small subunit.
  
 
 0.924
porA_1
Pyruvate synthase subunit porA.
  
 
 0.880
cfiA_1
2-oxoglutarate carboxylase large subunit.
    
 0.830
cfiA_2
2-oxoglutarate carboxylase large subunit.
    
 0.830
CUP47807.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.810
yccM_1
Putative electron transport protein yccM.
  
 
  0.788
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.782
acs
Acetyl-coenzyme A synthetase.
  
 0.662
accC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
 0.646
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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