Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gadB | gadC | ERS852463_03326 | ERS852463_03323 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate/gamma-aminobutyrate antiporter. | 0.941 |
gadB | gdh_1 | ERS852463_03326 | ERS852463_02203 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.801 |
gadB | gdh_2 | ERS852463_03326 | ERS852463_02214 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.801 |
gadB | glnA_3 | ERS852463_03326 | ERS852463_02234 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamine synthetase. | 0.806 |
gadB | glsA1 | ERS852463_03326 | ERS852463_03325 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutaminase 1; Belongs to the glutaminase family. | 0.976 |
gadB | gltB | ERS852463_03326 | ERS852463_00484 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Ferredoxin-dependent glutamate synthase 1. | 0.898 |
gadB | rocA | ERS852463_03326 | ERS852463_01771 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.819 |
gadC | gadB | ERS852463_03323 | ERS852463_03326 | Glutamate/gamma-aminobutyrate antiporter. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.941 |
gadC | glsA1 | ERS852463_03323 | ERS852463_03325 | Glutamate/gamma-aminobutyrate antiporter. | Glutaminase 1; Belongs to the glutaminase family. | 0.867 |
gdh_1 | gadB | ERS852463_02203 | ERS852463_03326 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.801 |
gdh_1 | gdh_2 | ERS852463_02203 | ERS852463_02214 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.777 |
gdh_1 | glnA_3 | ERS852463_02203 | ERS852463_02234 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.803 |
gdh_1 | glsA1 | ERS852463_02203 | ERS852463_03325 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutaminase 1; Belongs to the glutaminase family. | 0.795 |
gdh_1 | gltB | ERS852463_02203 | ERS852463_00484 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Ferredoxin-dependent glutamate synthase 1. | 0.999 |
gdh_1 | gltD_1 | ERS852463_02203 | ERS852463_00483 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase [NADPH] small chain. | 0.879 |
gdh_1 | murI | ERS852463_02203 | ERS852463_01641 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.447 |
gdh_1 | rocA | ERS852463_02203 | ERS852463_01771 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 1-pyrroline-5-carboxylate dehydrogenase. | 0.818 |
gdh_2 | gadB | ERS852463_02214 | ERS852463_03326 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.801 |
gdh_2 | gdh_1 | ERS852463_02214 | ERS852463_02203 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.777 |
gdh_2 | glnA_3 | ERS852463_02214 | ERS852463_02234 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.803 |
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