helD_1 protein (Parabacteroides merdae) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

helD_1

Helicase IV. (242 aa)

Predicted Functional Partners:

helD_2

0.991

CUP79312.1

0.976

rpoB

0.761

rpoC

0.751

CUO52510.1

0.729

rpoA

0.729

CUP79280.1

0.553

CUO46748.1

0.491

btr_8

0.457

CUP59383.1

0.445

Your Current Organism:

Parabacteroides merdae

NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUO46748.1	helD_1	ERS852463_00289	ERS852463_03403	Uncharacterized stress protein (general stress protein 26).	Helicase IV.	0.491
CUO46748.1	helD_2	ERS852463_00289	ERS852463_03404	Uncharacterized stress protein (general stress protein 26).	Helicase IV.	0.487
CUO52510.1	CUP59383.1	ERS852463_00434	ERS852463_02926	RNA polymerase Rpb6.	Superfamily I DNA and RNA helicases.	0.729
CUO52510.1	CUP79312.1	ERS852463_00434	ERS852463_03402	RNA polymerase Rpb6.	Uncharacterised protein.	0.729
CUO52510.1	helD_1	ERS852463_00434	ERS852463_03403	RNA polymerase Rpb6.	Helicase IV.	0.729
CUO52510.1	helD_2	ERS852463_00434	ERS852463_03404	RNA polymerase Rpb6.	Helicase IV.	0.729
CUO52510.1	rpoA	ERS852463_00434	ERS852463_03006	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUO52510.1	rpoB	ERS852463_00434	ERS852463_01734	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CUO52510.1	rpoC	ERS852463_00434	ERS852463_01735	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
CUP59383.1	CUO52510.1	ERS852463_02926	ERS852463_00434	Superfamily I DNA and RNA helicases.	RNA polymerase Rpb6.	0.729
CUP59383.1	helD_1	ERS852463_02926	ERS852463_03403	Superfamily I DNA and RNA helicases.	Helicase IV.	0.445
CUP59383.1	helD_2	ERS852463_02926	ERS852463_03404	Superfamily I DNA and RNA helicases.	Helicase IV.	0.580
CUP59383.1	rpoA	ERS852463_02926	ERS852463_03006	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.729
CUP59383.1	rpoB	ERS852463_02926	ERS852463_01734	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.761
CUP59383.1	rpoC	ERS852463_02926	ERS852463_01735	Superfamily I DNA and RNA helicases.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.751
CUP79280.1	CUP79312.1	ERS852463_03401	ERS852463_03402	Uncharacterised protein.	Uncharacterised protein.	0.553
CUP79280.1	helD_1	ERS852463_03401	ERS852463_03403	Uncharacterised protein.	Helicase IV.	0.553
CUP79280.1	helD_2	ERS852463_03401	ERS852463_03404	Uncharacterised protein.	Helicase IV.	0.484
CUP79312.1	CUO52510.1	ERS852463_03402	ERS852463_00434	Uncharacterised protein.	RNA polymerase Rpb6.	0.729
CUP79312.1	CUP79280.1	ERS852463_03402	ERS852463_03401	Uncharacterised protein.	Uncharacterised protein.	0.553