STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cptAPhosphoethanolamine transferase CptA. (572 aa)    
Predicted Functional Partners:
evgS_11
Sensor protein evgS precursor.
       0.776
CUP29191.1
Iron-sulfur cluster repair di-iron protein.
  
     0.607
CUO47941.1
4-amino-4-deoxy-L-arabinose transferase.
 
 
 0.576
CUO93887.1
Uncharacterized protein involved in outer membrane biogenesis.
  
    0.575
CUO55722.1
D-lyxose ketol-isomerase.
  
     0.556
CUP06415.1
Lipid A biosynthesis lauroyl acyltransferase.
  
  
 0.547
CUP37601.1
Lipid A 1-phosphatase.
 
  
 0.547
CUO55683.1
Uncharacterised protein.
  
     0.527
CUO47981.1
Predicted ATPase.
  
     0.508
CUO46959.1
Domain of uncharacterised function (DUF368).
     
 0.489
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.