STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUP83751.1Uncharacterised protein. (866 aa)    
Predicted Functional Partners:
CUP83785.1
Thiol-disulfide oxidoreductase.
 
     0.920
CUP70664.1
PAP2 superfamily.
  
     0.714
CUP72011.1
Predicted P-loop ATPase and inactivated derivatives.
  
     0.700
CUO69798.1
Outer membrane cobalamin receptor protein.
  
    0.695
CUO69764.1
SusD family.
  
     0.687
CUO98127.1
SusD family.
  
     0.681
CUO93780.1
Bacterial Ig-like domain (group 2).
  
     0.669
CUO58452.1
M56 family peptidase; Antirepressor regulating drug resistance%2C predicted signal transduction N-terminal membrane component.
  
   0.632
CUP57924.1
Oxidative stress defense protein.
  
     0.613
CUP34785.1
Predicted P-loop ATPase and inactivated derivatives.
  
     0.605
Your Current Organism:
Parabacteroides merdae
NCBI taxonomy Id: 46503
Other names: ATCC 43184, Bacteroides merdae, CCUG 38734, CIP 104202, JCM 9497, NCTC 13052, P. merdae, VPI T4-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.