STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfaGGlycosyltransferase. (357 aa)    
Predicted Functional Partners:
KWR57485.1
Polysaccharide biosynthesis protein.
  
 
  0.808
cysE_1
Serine acetyltransferase.
  
    0.777
KWR57487.1
Hypothetical protein.
       0.773
tuaC_1
Putative teichuronic acid biosynthesis glycosyltransferase, TuaC-like.
 
     0.723
glgB
Putative 1,4-alpha-glucan branching enzyme, GlgB-like.
   
 0.702
KWR57489.1
NAD synthetase.
  
    0.685
recQ_1
Putative ATP-dependent DNA helicase, RecQ-like.
    
 
 0.682
recQ_3
Putative ATP-dependent DNA helicase, RecQ-like.
    
 
 0.682
KWR57525.1
Hydrolases of the alpha/beta superfamily protein.
    
 
 0.649
mhpC
Putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
    
 
 0.649
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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