Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chonabc_2Chondroitin sulfate ABC exolyase precursor; Broad-specificity glycosaminoglycan lyase. (966 aa)    
Predicted Functional Partners:
KWR56022.1
Arylsulfatase.
 
  
 0.707
KWR54856.1
Protein of unknown function (DUF3604).
  
     0.695
KWR57815.1
Fasciclin domain protein.
  
     0.636
KWR54605.1
Bacterial DNA-binding protein.
  
     0.620
xly
Xanthan lyase precursor.
      
 0.618
KWR54865.1
Heparin lyase I precursor.
      
 0.618
KWR55574.1
SusD family protein.
 
   
 0.607
hepC_3
Heparin-sulfate lyase precursor; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Also able to degrade heparin and hyaluronic acid. Does not act on N,O-desulfated glucosamine or N-acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms. Belongs to the polysaccharide lyase 12 family.
 
     0.597
KWR57811.1
Putative glycosyltransferase, WbsX-like.
 
     0.594
KWR56629.1
Putative DNA-binding protein, histone-like.
  
     0.591
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.