STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pupAFerric-pseudobactin 358 receptor precursor. (1195 aa)    
Predicted Functional Partners:
KWR54826.1
Starch-binding associating with outer membrane.
 
   0.972
KWR54827.1
Putative zinc-binding metallo-peptidase.
 
    0.957
KWR54828.1
Protein of unknown function (DUF4302).
 
    0.957
KWR55673.1
SusD and RagB-like outer membrane lipoprotein.
  
 
   0.828
KWR53112.1
SusD and RagB-like outer membrane lipoprotein.
  
 
   0.798
KWR54829.1
Putative binding domain, N-terminal.
  
    0.789
KWR52457.1
SusD family protein.
  
 
   0.761
KWR57816.1
SusD family protein.
 
 
   0.694
KWR54860.1
SusD family protein.
 
 
   0.683
KWR56418.1
SusD and RagB-like outer membrane lipoprotein.
  
 
   0.677
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.