STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWR54828.1Protein of unknown function (DUF4302). (458 aa)    
Predicted Functional Partners:
KWR54827.1
Putative zinc-binding metallo-peptidase.
 
    0.965
KWR54826.1
Starch-binding associating with outer membrane.
 
    0.962
pupA
Ferric-pseudobactin 358 receptor precursor.
 
    0.957
KWR54830.1
Fibrobacter succinogenes major domain containing protein.
 
     0.861
KWR54829.1
Putative binding domain, N-terminal.
  
    0.845
KWR54831.1
Fibrobacter succinogenes major domain containing protein.
 
     0.765
KWR52733.1
Protein of unknown function (DUF4465).
  
     0.742
KWR57200.1
Protein of unknown function (DUF4957).
  
     0.739
KWR57812.1
Hypothetical protein.
  
     0.728
KWR57811.1
Putative glycosyltransferase, WbsX-like.
  
     0.721
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.