STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWR54895.1Hypothetical protein; Belongs to the UPF0246 family. (254 aa)    
Predicted Functional Partners:
KWR54551.1
Putative transporter.
  
    0.787
recJ
Putative single-stranded-DNA-specific exonuclease, RecJ-like.
       0.669
KWR54896.1
endonuclease/Exonuclease/phosphatase family protein.
       0.662
mnmC
Putative tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein, MnmC-like.
 
     0.448
KWR54802.1
Putative acetyltransferase.
       0.433
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.