STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWR54482.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
KWR54478.1
Toprim-like protein.
       0.813
KWR54481.1
Hypothetical protein.
       0.771
KWR54484.1
Hypothetical protein.
       0.750
KWR54479.1
Bacterial PH domain protein.
       0.741
KWR54480.1
Hypothetical protein.
       0.741
KWR54477.1
Hypothetical protein.
       0.703
mepM_4
Putative murein DD-endopeptidase, MepM-like.
       0.694
KWR54485.1
Hypothetical protein.
       0.674
KWR54476.1
Hypothetical protein.
       0.627
KWR54475.1
Protein of unknown function (DUF4099).
       0.578
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.