STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KWR54556.1Nitronate monooxygenase. (315 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.970
lpxC
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 
 0.934
fabI
Putative enoyl-(acyl-carrier-protein) reductase (NADH), FabI-like.
    
 0.921
lipB
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
    
  0.810
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.770
KWR54557.1
Protein of unknown function (DUF4858).
       0.678
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.663
KWR54558.1
Protein of unknown function (DUF4943).
       0.627
KWR54559.1
Hypothetical protein.
       0.607
ylaC_3
Putative RNA polymerase sigma factor, YlaC-like; Belongs to the sigma-70 factor family. ECF subfamily.
       0.607
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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