STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWR54263.1Leucine rich repeat protein. (594 aa)    
Predicted Functional Partners:
KWR54262.1
Leucine-rich repeat (LRR) protein.
 
     0.922
KWR54264.1
Leucine-rich repeat (LRR) protein.
 
   
 0.799
KWR54261.1
Putative binding domain, N-terminal.
       0.768
KWR54260.1
Hypothetical protein.
       0.746
KWR56954.1
Toprim domain protein.
  
     0.718
KWR54265.1
Hypothetical protein.
       0.714
KWR54259.1
Starch-binding associating with outer membrane.
       0.677
KWR54842.1
Leucine-rich repeat (LRR) protein.
 
     0.601
KWR54258.1
TonB-dependent receptor plug domain protein.
       0.593
pemA_1
Pectinesterase A precursor.
  
     0.475
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.