Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWR53981.1Hypothetical protein. (713 aa)    
Predicted Functional Partners:
ce
Cellobiose 2-epimerase.
       0.762
xylE_2
D-xylose-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.655
KWR53978.1
Protein of unknown function (DUF4434).
  
    0.616
KWR53977.1
FAD dependent oxidoreductase.
       0.563
ankX
Putative phosphocholine transferase, AnkX-like.
    
   0.493
arp_1
Ankyrin repeat protein.
    
   0.493
arp_2
Ankyrin repeat protein.
    
   0.493
btuB_4
Putative vitamin B12 transporter, BtuB-like.
       0.419
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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