STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tssNBacterodales T6SS protein TssN. (292 aa)    
Predicted Functional Partners:
tssF
Bacterodales T6SS protein TssF.
 
   
 0.970
tssK
Bacterodales T6SS protein TssK.
 
     0.966
tssP
Bacterodales T6SS protein TssP.
 
     0.958
tssE
Bacterodales T6SS protein TssE.
 
     0.945
tssH
Bacterodales T6SS protein TssH (ClpV); Belongs to the ClpA/ClpB family.
 
     0.911
tssB
Bacterodales T6SS protein TssB.
 
     0.892
tssC
Bacterodales T6SS protein TssC.
 
   
 0.892
tssR
Bacterodales T6SS protein TssR.
     
 0.872
tssG
Bacterodales T6SS protein TssG.
     
 0.818
tssO
Bacterodales T6SS protein TssO.
     
 0.816
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
Server load: low (26%) [HD]