STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepC_2Putative outer membrane efflux protein, BepC precursor-like. (452 aa)    
Predicted Functional Partners:
ttgG
Putative toluene efflux pump periplasmic linker protein, TtgG precursor-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.978
mdtB_3
Putative multidrug resistance protein, MdtB-like; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.927
bepF
Putative efflux pump periplasmic linker, BepF-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.808
srpA_2
Putative solvent efflux pump periplasmic linker, SrpA precursor-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.803
srpA_1
Putative solvent efflux pump periplasmic linker, SrpA precursor-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.801
mdtA_1
Putative multidrug resistance protein, MdtA precursor-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.791
bepE_1
Putative efflux pump membrane transporter, BepE-like; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.788
mdtB_2
Putative multidrug resistance protein, MdtB-like; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.785
mdtE_2
Putative multidrug resistance protein, MdtE precursor-like; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.761
bepE_2
Putative efflux pump membrane transporter, BepE-like; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.753
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.