Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWR53620.1Mfa1/Mfa2-like fimbrillin-A associated anchor protein. (295 aa)    
Predicted Functional Partners:
KWR53619.1
Mfa1/Mfa2-like fimbrillin-A associated anchor protein.
       0.757
KWR53618.1
Hypothetical protein.
       0.721
KWR53621.1
FimA-like major fimbrial subunit protein.
       0.683
KWR53622.1
Protein of unknown function (DUF3575).
       0.542
KWR53623.1
Hypothetical protein.
       0.522
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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