Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amiC | resA_1 | AA415_02819 | AA415_02568 | N-acetylmuramoyl-L-alanine amidase. | Putative thiol-disulfide oxidoreductase, ResA-like. | 0.433 |
aspA | resA_1 | AA415_02569 | AA415_02568 | Aspartate ammonia-lyase. | Putative thiol-disulfide oxidoreductase, ResA-like. | 0.430 |
aspA | thrA | AA415_02569 | AA415_03008 | Aspartate ammonia-lyase. | Bifunctional aspartokinase/homoserine dehydrogenase 1. | 0.911 |
metH_1 | metH_2 | AA415_00540 | AA415_00596 | Methionine synthase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.996 |
metH_1 | resA_1 | AA415_00540 | AA415_02568 | Methionine synthase. | Putative thiol-disulfide oxidoreductase, ResA-like. | 0.510 |
metH_1 | thrA | AA415_00540 | AA415_03008 | Methionine synthase. | Bifunctional aspartokinase/homoserine dehydrogenase 1. | 0.995 |
metH_1 | trxA_1 | AA415_00540 | AA415_00550 | Methionine synthase. | Thioredoxin. | 0.561 |
metH_2 | metH_1 | AA415_00596 | AA415_00540 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Methionine synthase. | 0.996 |
metH_2 | resA_1 | AA415_00596 | AA415_02568 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative thiol-disulfide oxidoreductase, ResA-like. | 0.510 |
metH_2 | thrA | AA415_00596 | AA415_03008 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Bifunctional aspartokinase/homoserine dehydrogenase 1. | 0.995 |
metH_2 | trxA_1 | AA415_00596 | AA415_00550 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Thioredoxin. | 0.561 |
resA_1 | amiC | AA415_02568 | AA415_02819 | Putative thiol-disulfide oxidoreductase, ResA-like. | N-acetylmuramoyl-L-alanine amidase. | 0.433 |
resA_1 | aspA | AA415_02568 | AA415_02569 | Putative thiol-disulfide oxidoreductase, ResA-like. | Aspartate ammonia-lyase. | 0.430 |
resA_1 | metH_1 | AA415_02568 | AA415_00540 | Putative thiol-disulfide oxidoreductase, ResA-like. | Methionine synthase. | 0.510 |
resA_1 | metH_2 | AA415_02568 | AA415_00596 | Putative thiol-disulfide oxidoreductase, ResA-like. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.510 |
resA_1 | thrA | AA415_02568 | AA415_03008 | Putative thiol-disulfide oxidoreductase, ResA-like. | Bifunctional aspartokinase/homoserine dehydrogenase 1. | 0.409 |
resA_1 | trxA_1 | AA415_02568 | AA415_00550 | Putative thiol-disulfide oxidoreductase, ResA-like. | Thioredoxin. | 0.450 |
thrA | aspA | AA415_03008 | AA415_02569 | Bifunctional aspartokinase/homoserine dehydrogenase 1. | Aspartate ammonia-lyase. | 0.911 |
thrA | metH_1 | AA415_03008 | AA415_00540 | Bifunctional aspartokinase/homoserine dehydrogenase 1. | Methionine synthase. | 0.995 |
thrA | metH_2 | AA415_03008 | AA415_00596 | Bifunctional aspartokinase/homoserine dehydrogenase 1. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.995 |
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