STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWR53008.1Wzi-like capsule assembly protein. (494 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.858
KWR53011.1
Protein of unknown function (DUF4738).
       0.834
tuaD_2
Putative UDP-glucose 6-dehydrogenase, TuaD-like.
       0.792
KWR53007.1
Sporulation related domain protein.
 
     0.763
cobN
Putative aerobic cobaltochelatase subunit, CobN-like.
  
 0.655
KWR55138.1
Putative methyltransferase.
 
 
 0.634
KWR57065.1
Hypothetical protein.
  
     0.608
KWR54238.1
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase.
   
 0.581
KWR57585.1
Putative DNA-binding transcriptional regulator.
  
     0.570
KWR57575.1
Hypothetical protein.
 
  
  0.569
Your Current Organism:
Bacteroides stercoris
NCBI taxonomy Id: 46506
Other names: ATCC 43183, B. stercoris, CCUG 38733, CIP 104203, JCM 9496, NCTC 13053, VPI B5-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.