STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS29830.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
ACS31591.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
     0.617
ACS31588.1
Hypothetical protein; TIGRFAM: lycopene cyclase domain.
 
     0.585
ACS31587.1
Hypothetical protein; TIGRFAM: lycopene cyclase domain.
 
     0.578
ACS31589.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
 
     0.550
ACS29829.1
Predicted HAD superfamily hydrolase.
     
 0.549
ACS31590.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
     0.529
ACS29831.1
Micrococcal nuclease-like nuclease; PFAM: Staphylococcal nuclease homologue.
       0.482
ACS29828.1
Pyruvate dehydrogenase (cytochrome); PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Belongs to the TPP enzyme family.
  
    0.443
ACS30750.1
Putative ComEC/Rec2-related protein; PFAM: Metallo-beta-lactamase superfamily; Competence protein; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.428
Your Current Organism:
Micrococcus luteus NCTC 2665
NCBI taxonomy Id: 465515
Other names: M. luteus NCTC 2665, Micrococcus luteus ATCC 4698, Micrococcus luteus CCM 169, Micrococcus luteus DSM 20030, Micrococcus luteus Fleming 2665, Micrococcus luteus NCIB 9278, Micrococcus luteus str. NCTC 2665, Micrococcus luteus strain NCTC 2665
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