STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS30519.1TIGRFAM: conserved hypothetical protein TIGR03085; uncharacterized Actinobacterial protein TIGR03083. (211 aa)    
Predicted Functional Partners:
ACS30607.1
Glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase central domain; Conserved region in glutamate synthase; Glutamine amidotransferases class-II; GXGXG motif.
  
 
 0.930
ACS30718.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
 
 
 0.854
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.809
ACS31729.1
glycine/D-amino acid oxidase, deaminating; PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase.
  
 
 0.745
ACS30517.1
uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain.
  
  
 0.727
ACS30719.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.641
ACS30516.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   
 0.635
ACS31018.1
Hypothetical protein.
  
     0.635
ACS30515.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
     
 0.626
ACS30518.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
     
 0.584
Your Current Organism:
Micrococcus luteus NCTC 2665
NCBI taxonomy Id: 465515
Other names: M. luteus NCTC 2665, Micrococcus luteus ATCC 4698, Micrococcus luteus CCM 169, Micrococcus luteus DSM 20030, Micrococcus luteus Fleming 2665, Micrococcus luteus NCIB 9278, Micrococcus luteus str. NCTC 2665, Micrococcus luteus strain NCTC 2665
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