STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS30704.1Hypothetical protein. (361 aa)    
Predicted Functional Partners:
ACS30765.1
Hypothetical protein.
 
     0.775
ACS30245.1
Hypothetical protein.
  
     0.770
ACS30025.1
Succinate dehydrogenase subunit D.
  
     0.768
ACS30585.1
PFAM: AFG1-like ATPase.
  
     0.768
ACS30955.1
Hypothetical protein.
  
     0.761
ACS30026.1
PFAM: Succinate dehydrogenase cytochrome b subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit.
  
     0.757
ACS30703.1
Superfamily II RNA helicase; PFAM: DSHCT (NUC185) domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain.
       0.741
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
     0.705
ACS30972.1
Hypothetical protein.
  
     0.627
ACS30705.1
Glycosyl transferase; Catalyzes the transfer of mannose from GDP-mannose to D- mannosyl-1-phosphoundecaprenol; Belongs to the glycosyltransferase 2 family.
  
    0.615
Your Current Organism:
Micrococcus luteus NCTC 2665
NCBI taxonomy Id: 465515
Other names: M. luteus NCTC 2665, Micrococcus luteus ATCC 4698, Micrococcus luteus CCM 169, Micrococcus luteus DSM 20030, Micrococcus luteus Fleming 2665, Micrococcus luteus NCIB 9278, Micrococcus luteus str. NCTC 2665, Micrococcus luteus strain NCTC 2665
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